Hepatitis E Virus Genotyping Tool Version 1.0

Hepatitis E Virus Genotyping Tool Version 1.0

This tool is designed to use phylogenetic methods in order to identify the Hepatitis E virus genotype of a nucleotide sequence.
The tool has been updated according to: Smith DB et al. Update: proposed reference sequences for subtypes of hepatitis E virus (species Orthohepevirus A). J Gen Virol. 2020 Jul;101(7):692-698.
Note for batch analysis: The genotypetool accepts up to 20000 sequences at a time.

You may either:

  1. Paste one or more sequences in FASTA format in the input field.
  2. Upload a FASTA file.
  3. Upload FASTQ files.
  4. Revisit results of a previous run

A) Paste nucleotide sequence(s) in FASTA format:

B) Or, upload a FASTA with nucleotide sequences:

C) Or, revisit results from a previous run:

Job-id:

Developed by: RIVM (Harry Vennema, Annelies Kroneman) and Emweb bvba.

Contact: TBD